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Due to ever increasing water demand, the preservation of water quality is becoming a very important issue. Eutrophication is amongst the particular problems threatening the quality of water. This paper begins with presenting a mathematical model for aeration process in lake used to combat water eutrophication. Two phases are numerically simulated to study the injected air effect on water by using a corrected one phase model described by Navier–Stokes equations with variable density and viscosity representing the mixture. This model is numerically studied by coupling characteristics scheme for time discretization and mixed finite element method for space approximation. An error estimates in space and time for the velocity are obtained. Numerical results are given firstly in support of the mathematical analysis and secondly to simulate a real application case of the studied problem.