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The model used for analyzing the gain characteristics of Er-doped waveguide amplifier (EDWA) is based on the rate-propagation equations with intensity profiles of pump and signal light (IPPSL). This simulation indicates that the IPPSL have significant effect on the gain of signal light. The results show that a gain change 2.3 dB of signal light at 1534 nm is obtained for a 4 cm long channel waveguide amplifier with different intensity profiles pumped by 80 mW at 980 nm. Experiment also shows that a gain change about 2.31 dB at 1534 nm for the channel waveguide of 4 cm length is obtained for different IPPSL. Thus, the effect of IPPSL should be considered to enhance the pump efficiency in the design of EDWA.