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    COVID-19 Testing: Frequency Wins over Sensitivity in Control of Disease Transmission

    Nano LIFE05 Dec 2020

    Emerging pathogens have no known therapies or vaccines and therefore can only be controlled via traditional methods of contact tracing, quarantine and isolation that require rapid and widespread testing. The most recent outbreak from an emerging pathogen is due to the highly transmissible SARS-CoV-2 virus causing COVID-19 disease, which is associated with no symptoms or mild symptoms in 80–90% of the infected individuals, while in the remainder of the patients it exhibits severe illness that can be lethal or persist for several weeks to months after infection. The first tests to diagnose infection by SARS-CoV-2 were developed soon after the genome of the virus became known, and use probes to measure viral RNA by reverse transcriptase-polymerase chain reaction (RT-PCR). These tests are highly sensitive and specific but can require several days to return results, which makes contact tracing and more generally efforts to control the spread of the infection very difficult. Furthermore, the sensitivity threshold is orders of magnitude below the viral load necessary for transmission; therefore, individuals recovering from the infection may still be have a positive test and be required to isolate unnecessarily while they are no longer infectious. Antigen tests were subsequently developed that use antibodies mostly targeted to the nucleocapsid protein of the virus. These tests are about 100 times less sensitive than RT-PCR, yes they detect viral loads that are about 1/10 that needed for transmission. Furthermore, such tests are potentially much cheaper than RT-PCR and yield results in 15 min or less. Antibody, also known as serological testing, is available and can provide useful information to understand the extent to which a population has been exposed to the virus; however, it is not a good indicator of current infection and not useful for infection control. Viral transmission models that incorporate testing and contact tracing show that infection control is much more readily achieved by increasing testing frequency than by using higher sensitivity testing. For example, compared to no testing at all, testing once every other week has a marginal benefit, while testing weekly can decrease the number of infections to 20–40%, and testing twice weekly or more can bring about a 95%+ reduction in infections. These lessons learned from dealing from the COVID-19 pandemic should guide future planning against potential emerging viruses.

  • articleNo Access

    Repeated Nucleic Acid Tests Are Necessary for Early Diagnosis of Atypical COVID-19: A Case Report

    Nano LIFE01 Mar 2020

    In Wuhan, China, the first case of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was reported on December 8, 2019. The patient’s symptoms included fever, coughing and breathing difficulties. According to the sixth China version of 2019 coronavirus disease (COVID-19) diagnostic criteria, some patients with COVID-19 may present atypical symptoms and have negative nucleic acid tests (NATs), possibly leading to misdiagnosis and viral transmission.

    Our patient was a 29-year-old woman who complained of a three-day history of nasal obstruction, and no fever, coughing or breathing difficulties were noted. Physical examination revealed no obvious signs of pneumonia. On January 16, 2020, the patient flew from Wuhan to Germany for a business trip and returned to Shanghai on January 28, a passenger on her flight was tested positive for SARS-CoV-2 later. Although two consecutive NATs performed at an interval of 24 h were negative, considering her direct contact with a SARS-CoV-2-infected individual, a 64-slice computed tomography (CT) scan showed a few scattered ground-glass nodules in the left lung, suggesting possible viral pneumonia. Given the clinical characteristics, epidemiological records, CT findings and a third positive NAT, our patient was diagnosed with COVID-19.

    The combination of history of epidemiology, clinical symptom, lung CT scan and routine blood test will improve the clinical diagnosis of asymptomatic COVID-19, but the early diagnosis of COVID-19 can be confirmed only by the repeated NATs.