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  • articleOpen Access

    Tracking the Reorganization of Module Structure in Time-Varying Weighted Brain Functional Connectivity Networks

    Identification of module structure in brain functional networks is a promising way to obtain novel insights into neural information processing, as modules correspond to delineated brain regions in which interactions are strongly increased. Tracking of network modules in time-varying brain functional networks is not yet commonly considered in neuroscience despite its potential for gaining an understanding of the time evolution of functional interaction patterns and associated changing degrees of functional segregation and integration. We introduce a general computational framework for extracting consensus partitions from defined time windows in sequences of weighted directed edge-complete networks and show how the temporal reorganization of the module structure can be tracked and visualized. Part of the framework is a new approach for computing edge weight thresholds for individual networks based on multiobjective optimization of module structure quality criteria as well as an approach for matching modules across time steps. By testing our framework using synthetic network sequences and applying it to brain functional networks computed from electroencephalographic recordings of healthy subjects that were exposed to a major balance perturbation, we demonstrate the framework’s potential for gaining meaningful insights into dynamic brain function in the form of evolving network modules. The precise chronology of the neural processing inferred with our framework and its interpretation helps to improve the currently incomplete understanding of the cortical contribution for the compensation of such balance perturbations.

  • articleNo Access

    Find modules in signed networks based on modularity optimization

    The signed network depicts individual cooperative or hostile attitude in a system. It is very important to study the characteristics of complex networks and predict individual attitudes by analyzing the attitudes of individuals and their neighbors, which can divide individuals into different modules or communities. To detect the modules in signed networks, first, a modularity function for signed networks is utilized on the basis of the existing modularity function. Then, a new module detection algorithm for signed networks has also been put forward, which has high efficiency. Finally, the algorithm has been applied on both artificial and real networks. The results show that the number of modules given by our proposed algorithm is consistent with that of the number of actual modules.

  • articleNo Access

    On a triply graded Khovanov homology

    Cobordisms are naturally bigraded and we show that this grading extends to Khovanov homology, making it a triply graded theory. Although the new grading does not make the homology a stronger invariant, it can be used to show that odd Khovanov homology is multiplicative with respect to disjoint unions and connected sums of links; same results hold for the generalized Khovanov homology defined by the author in his previous work. We also examine the module structure on both odd and even Khovanov homology, in particular computing the effect of sliding a basepoint through a crossing on the integral homology.