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Common bullies, Gobiomorphus cotidianus, are a widespread small New Zealand freshwater fish, with a life-cycle that may include an optional juvenile marine phase. We used the strontium variation in fish otoliths in an attempt to track the life history of the individual fish since the interlayer variation reflect the exposure of fish to background environmental levels of Sr at the time of deposition. One possible mechanism by which Sr can be enriched in otoliths is by seawater, which usually has a higher Sr/Ca ratio than fresh water. Locally resolved elemental measurements with a proton microprobe enable therefore the detection of variation in Sr that may reflect single or multiple migrations of freshwater fish into seawater. The most striking feature of this study is the observation of high Sr/Ca ratios in the cores of all otoliths, including those from fish caught 50 km inland. This suggests different environments in the life cycle of common bullies in the lower reaches of the Clutha river. A marine juvenile phase may be a common feature. Preliminary area scans were used to select suitable transects for detailed line scans which gave greatly improved statistics.

Since biological or biomedical studies by nuclear microscopy are limited by irradiation damage, we developed an in-air system in order to cool down the biological samples by convection. The behavior of the beam extraction window is an important parameter of our system. Then, we investigated the behavior of a polyethylene teraphtalate (PET) thin-film used as beam extraction window during in-air irradiation by STIM (Scanning Transmission Ion Microscopy) and RBS (Rutherford Backscattering Spectrometry) methods. We found that it is better to flow helium than air atmosphere because in-air irradiation enhances the degradation of the PET film.

The construction of a new Nuclear Microprobe at the Livermore multi-user 10 MV FN tandem Laboratory has recently been completed. The facility is primarily used for PIXE, PIGE and Proton energy loss tomography (PELT) in a broad range of multi-disciplinary sciences. Details of the new facility and current applications/programs are discussed.

The simultaneously applied techniques of Particle Induced X-ray Emission (PIXE), Rutherford Backscattering Spectrometry (RBS) and Scanning Transmission Ion Microscopy (STIM), have been successful in mapping and quantifying trace elements during the progression of several human diseases, in particular those degenerative diseases which have a corresponding animal model. In atherosclerosis, iron has been shown to be present in increased concentrations at the early stage of lesion formation, and when the animal model has been kept anaemic, the artery wall shows a reduced uptake of iron and a delay in lesion formation compared with controls. In Parkinson's disease, there is also an increased concentration of iron in the substantia nigra region of the brain. Although the increase in bulk iron appears to lag behind the dopaminergic cell death, we have detected an increase in localized deposits of iron at the onset of cell death. These two results infer that iron may play a role in both diseases, perhaps through the mediation of free radicals. The induction of epilepsy through the injection of kainic acid has shown that the cell death is accompanied by an increase in calcium levels as early as one day after injection. The increase in calcium is consistent with activation of phospholipase A₂ and free radical damage.

High-resolution nuclear microscopy was used to study the layered structure in the shell of the pacific oyster, Crassostrea gigas. In cross section, the layers appear as opaque white zones and clearer translucent zones. Raman spectroscopy indicates that the zones consist of alternating layers of the aragonite and calcite morphs of calcium carbonate, the mineral constituent of the shell. The chemistry of the shell varies from individual to individual but generally the predominant metal ion is Ca, with varying amounts of Si, Cl, Cr, Mn, Fe, Zn, Sb, Ni, Fe, As and Sr. Two dimensional maps of these major, minor and trace elements were measured in many shells with nuclear microscopy to identify the patterns of Zn and Sr deposition reflecting the calcite and aragonite layers. The significant difference in the patterns identified by ion beam analyses are possibly a result of isostructural exclusion of these metal ions between the different aragonite and calcite polymorphic forms of calcium carbonate.