In this study, the sol–gel method was used to prepare ZnO seed layer for synthesizing ZnO nanorods, and we would investigate the effects of different Zn(CH3COO)2 and C6H12N4 concentrations on the synthesized characteristics of ZnO nanorods. First, the ZnO gel was dipped on the surface of the P-type Si〈100〉 wafer as a seed layer. Then, the hydrothermal method with different Zn(CH3COO)2 and C6H12N4 concentrations as precursors was used to synthesize ZnO nanorods on P-type Si〈100〉 wafer. X-ray diffraction (XRD) pattern, focused ion beam-field emission scanning electron microscopy (FIB-FESEM) and photoluminescence (PL) spectrometry were employed to observe and analyze the crystal properties, surface morphologies, and optical properties of the prepared ZnO seed layer and synthesized ZnO nanorods. 90∘C and 60 min were used as the synthesis temperature and time, and we found that Zn(CH3COO)2 and C6H12N4 concentrations had an apparent effect on the height, diameter, total surface area, total volume, density, and PL property of ZnO nanorods. The maximum PL emission intensity of ZnO nanorods presented in the samples with Zn(CH3COO)2 and C6H12N4 concentrations of 0.2 M. The results of XRD patterns suggest that ZnO nanorods have the property of c-axis preferred orientation. We showed that the different Zn(CH3COO)2 concentrations had large effects on the average height, average diameter, aspect ratio, total surface area (S, nm2), total volume (V, nm3), S/V ratio, and PL property of ZnO nanorods.